The nodules transcriptomes of Datisca glomerata and Ceanothus thyrsiflorus were de novo assembled by Trinity and annotated using the Trinotate pipeline. Transcript abundance was estimated for enzymes involved in ROS detoxification by RSEM and presented as transcript per million reads (TPM).
Funding
Swedish Research Council Vetenskapsradet (VR 2012-03061 to Katharina Pawlowski)
History
Original title
Actinorhizal Cucurbitales vs. Rosales: comparative analysis of the nodule transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales)
Original language
English
Associated Publication
Salgado et al. 2018 manuscript submitted to Frontiers in Plant Sciences